Optical Imaging Session

Optical Imaging Session

Optical Imaging Session (OIS) data type and processing pipeline. This software was developed for the Joe Culver lab at Washington University for use in the fcMicrobiota project, which uses optical functional connectivity scans to study the effects of immature gut microbiome in mice. This package includes: the OIS data type module, the OIS pipeline module, and a python script for uploading OIS data to XNAT.